Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890837.1_cds_XP_016445547.1_40496
CDS Infomation

[gene=LOC107770729] [db_xref=GeneID:107770729] [protein=putative disease resistance RPP13-like protein 1] [protein_id=XP_016445547.1] [location=complement(join(21046..22725,23741..23848,25158..25163))] [gbkey=CDS]
Sequence

ATGAAGGATGATGATTCTTCAACATTCGGGGGAGGGCACAATTGCCATACATGCTTGGGA
TGTAATTGTTTGAAACCTCTTCCTCTTCTCCCGCAACACCTGCATACAATGAAGATTTGC
AGAATATTTCGAGGAGTATACATACTTGTCAAGATAATTAGGGCGATGACATGTAACGAG
GGATTGAGCAACAATTTTGAAGCGACCATCATATCCCAACATTTAAACTTGGAGGAGCTT
CCGGATCGCCTAACTGATTATTATTCTCTCTGGCCTTCTAATATTGAGTTTGACAAGGAT
AAGGTGATCCGATTATGGATTGCACAAGGGTTCTTTGATTTTGAGTATGGGCGGGGAGTG
GAGATTGTGGCTAACAAGTATTTCGAGGACATGCTTAAGGTGAATCGTATAGTGCAATCA
AGATTTGATATGGCCACCGGAAGAATAAAATACAAAGTTGGGTCCTCATGTTCAAACTCG
TGGGTACAAGAAGCACAATTGAGTAGTATTGCAGAAGAAGTCCAAAAATTATTCTTACTC
TCTGAGAGCTTTGGAAAAGACACTCTCAAAACTCTCCAAAAATTCAACCAGTTGCGCACC
CTTGTATTGTCCTGTCGCCATAAACATTCCTTCAAGCGAGTACCTGATCATCTCTTTCTC
AAGATGCAACACTTGAGAACTATGGACTTGCATGCGACTAACATAACTGAGTTGCCTAAT
TCCATTAGCTATTTGTCATCTTTGCGTTATCTTGATGTCTCCGACACACCTATTAGACTC
CTTCCTGAATCTATAGGTAGGCTTTGGTATTTACAAATACTAAAGTTGGAGCGTTGTTCT
AATTTTTCGAGATTACCATACTGTACTAGCAAGTTGGTTAATTTGCGCCATTTGGATCTT
AACATTGTTGGCCAACTAAGGTCAATGCCAGTTGGAATGGGTAATCTGACCCGCCTTCAG
ACACTTAAAGGGTTCATTCTTGGCAAGGGGGAAGGTTATGGTGTGAGAGAGTTGAGGCAG
CTCACTGATCTTTGCGGGTCAATTCAGATTTCAAGACTTGAGAATATTTCAAGTGTCGAA
GAGGCTAGAGAAGTTGAGCTAAACAAGAAACATCTCGATAAGTTGGAGTTGCAATGGGAA
CATCATCAAGATGATTTCCCTTTTTTAGTTGAGGAGATATTGGAATATCTTCAGCCTCAT
TTGAGCCTCAAAGAGTTACAGATATCTTTCTATAATGGCTCTAGTTTTCCTACGTGGATG
AGTAATTCGTATTTGTCCAACATTGTGAGTATCACTCTCTTGGAGTGTAAAAGTTGTATC
GACTTGCCATTCCTTGGAGGTCTACAGTCACTTAAGTCTCTTCTCCTTTTTCGCATGTAT
GGGGTAAGATCTATTGATAGTCGCTTTTGTAGATATGGGGGGAGTCAAGTAGGACCTGCA
TTTCCAAAGCTTGAAAAATTAAAAATTGATGGAATGCCAAAACTTGAAAAATGGACAGGC
GTGAAGAATGGGGATTTTCCATGTCTCCTTCAGTTATCAGTGATATGCTGCCCTAAACTT
GTTGCAATCCCCATGCTTCCACTTCTTAGCGCTCTCAAAATTTTGTATATTTCTTATTGT
TATGAGCTTCAGTCATTTCCTAAGGGAAAACTTCCATCAAAGCTGGAATCTCTTGCTATA
TCAAATTGTCCACTATTAAAGAAACGTTGTCTTAAGCTTCAAGGTAAGGATTGGTCTAAG
ATTAAACACATACCTTCAATCTTCATTGATCGTGAAGAGATGTCTTCAACTTAA

Peptide Sequence

PEP ID

XP_016445547.1
PEP Infomation

PREDICTED: putative disease resistance RPP13-like protein 1 [Nicotiana tabacum]
Sequence

MKDDDSSTFGGGHNCHTCLGCNCLKPLPLLPQHLHTMKICRIFRGVYILVKIIRAMTCNE
GLSNNFEATIISQHLNLEELPDRLTDYYSLWPSNIEFDKDKVIRLWIAQGFFDFEYGRGV
EIVANKYFEDMLKVNRIVQSRFDMATGRIKYKVGSSCSNSWVQEAQLSSIAEEVQKLFLL
SESFGKDTLKTLQKFNQLRTLVLSCRHKHSFKRVPDHLFLKMQHLRTMDLHATNITELPN
SISYLSSLRYLDVSDTPIRLLPESIGRLWYLQILKLERCSNFSRLPYCTSKLVNLRHLDL
NIVGQLRSMPVGMGNLTRLQTLKGFILGKGEGYGVRELRQLTDLCGSIQISRLENISSVE
EAREVELNKKHLDKLELQWEHHQDDFPFLVEEILEYLQPHLSLKELQISFYNGSSFPTWM
SNSYLSNIVSITLLECKSCIDLPFLGGLQSLKSLLLFRMYGVRSIDSRFCRYGGSQVGPA
FPKLEKLKIDGMPKLEKWTGVKNGDFPCLLQLSVICCPKLVAIPMLPLLSALKILYISYC
YELQSFPKGKLPSKLESLAISNCPLLKKRCLKLQGKDWSKIKHIPSIFIDREEMSST

Transcript Sequence

Gene sequence data has not been registered.